Genomics Content / Genomics Content for 51łÔąĎşÚÁĎ Davis en Population Decline of Franklin’s Bumble Bee Wasn’t Due to Pathogens, Museum Genomic Research Shows /blog/population-decline-franklins-bumble-bee-wasnt-due-pathogens-museum-genomic-research-shows <p><span>Franklin’s bumble bee (Bombus franklini) once inhabited a remote area spanning northern California and southern Oregon. But the bee’s numbers declined sharply after 1998 and it hasn’t been seen at all since 2006. A new study of the DNA of museum specimens, published this week in </span><a href="https://www.pnas.org/doi/10.1073/pnas.2509749122"><span>Proceedings of the National Academy of Sciences</span></a><span>, suggests this decline was most likely due to population bottlenecks and environmental issues such as fire and drought rather than infectious diseases.&nbsp;</span></p> October 20, 2025 - 3:38pm Andy Fell /blog/population-decline-franklins-bumble-bee-wasnt-due-pathogens-museum-genomic-research-shows Finding Human Brain Genes in Duplicated DNA /news/finding-human-brain-genes-duplicated-dna <p>What makes the human brain distinctive? A new study <a href="https://www.cell.com/cell/fulltext/S0092-8674(25)00739-1">published July 21 in Cell</a> identifies two genes linked to human brain features and provides a road map to discover many more. The research could lead to insights into the functioning and evolution of the human brain, as well as the roots of language disorders and autism.</p> July 21, 2025 - 11:04am Andy Fell /news/finding-human-brain-genes-duplicated-dna 3D Genome Structure Guides Sperm Development /news/3d-genome-structure-guides-sperm-development How 3D folding of DNA inside germ cells sets them on the path to become sperm. March 03, 2025 - 11:22am Andy Fell /news/3d-genome-structure-guides-sperm-development No Evidence of a Common Set of Regeneration Genes /blog/no-evidence-common-set-regeneration-genes <p>Some animals, especially those that have been around for a long time in evolutionary terms, possess extraordinary abilities to regenerate lost limbs or organs. These animals, such as flatworms, salamanders and zebrafish, are not at all closely related, suggesting that the ability to regenerate goes far back in evolutionary time. Is it possible to find a common set of genes for regeneration, that could unlock a new understanding of this process?&nbsp;</p> August 19, 2024 - 2:57pm Andy Fell /blog/no-evidence-common-set-regeneration-genes More Than Meows: How Bacteria Help Cats Communicate /curiosity/news/more-meows-how-bacteria-help-cats-communicate <p><span><span><span>Many mammals, from domestic cats and dogs to giant pandas, use scent to communicate with each other. A new study from the University of California, Davis, shows how domestic cats send signals to each other using odors derived from families of bacteria living in their anal glands. The work was published Nov. 8 in <a href="https://www.nature.com/articles/s41598-023-45997-1">Scientific Reports</a>. </span></span></span></p> November 15, 2023 - 10:15am Andy Fell /curiosity/news/more-meows-how-bacteria-help-cats-communicate 51łÔąĎşÚÁĎ Davis Researchers Unlock Valuable Information in Chicken Genome /blog/uc-davis-researchers-unlock-valuable-information-chicken-genome <p><span><span><span><span><span><span><span>Chickens provide one of the world's most popular animal proteins, with billions of birds grown every year for eggs and meat. Interpreting the farm animal’s genome is vital for understanding how genes control traits, such as growth, feed efficiency, reproduction and disease resistance.</span></span></span></span></span></span></span></p> May 04, 2023 - 3:03pm Andy Fell /blog/uc-davis-researchers-unlock-valuable-information-chicken-genome Zoonomia Consortium Unveils Mammal Genomes, Creates Evolutionary Timeline /curiosity/news/zoonomia-consortium-unveils-mammal-genomes-creates-evolutionary-timeline <p><span><span><span><span><span><span><span><span>Mammals are an extraordinarily diverse and successful group of animals, from the tiniest pygmy shrew to the mighty blue whale, and including, of course, ourselves. In a <a href="https://www.science.org/toc/science/380/6643">special issue of the journal Science</a> published today (April 27), the <a href="https://zoonomiaproject.org">Zoonomia Consortium</a> shows how comparing the genomes of 240 modern mammals sheds light on mammalian evolution, with implications for conservation and understanding human and animal health.</span></span></span></span></span></span></span></span></p> April 27, 2023 - 11:00am Andy Fell /curiosity/news/zoonomia-consortium-unveils-mammal-genomes-creates-evolutionary-timeline Revealing the Genome of the Common Ancestor of All Mammals /curiosity/news/revealing-genome-common-ancestor-all-mammals <p><span><span><span><span><span><span><span><span>Every modern mammal, from a platypus to a blue whale, is descended from a common ancestor that lived about 180 million years ago. We don’t know a great deal about this animal, but the organization of its genome has now been computationally reconstructed by an international team of researchers. The work is published Sept. 30 in <a href="https://doi.org/10.1073/pnas.2209139119">Proceedings of the National Academy of Sciences</a>. </span></span></span></span></span></span></span></span></p> September 27, 2022 - 9:30am Andy Fell /curiosity/news/revealing-genome-common-ancestor-all-mammals Genomics by Africans for Africans /blog/genomics-africans-africans-african-biogenome-project-sets-out-goals-and-roadmap <p><span><span><span><span><span><span><span><span>The African BioGenome Project (<a href="https://africanbiogenome.org/">AfricaBP</a>) has published a <a href="https://www.nature.com/articles/d41586-022-00712-4">position paper in Nature</a> highlighting the goals, priorities, and roadmap of the Africa-led effort to sequence the genomes of 105,000 species of plants, animals, fungi and protists that are endemic to the continent. </span></span></span></span></span></span></span></span></p> March 15, 2022 - 11:49am Andy Fell /blog/genomics-africans-africans-african-biogenome-project-sets-out-goals-and-roadmap Sequencing Puts Carnivore Chromosomes in Context /blog/sequencing-puts-carnivore-chromosomes-context <p><span><span><span><span><span><span><span><span>Studies comparing animal genomes generally focus on the DNA sequence itself. A new study by researchers at the University of California, Davis shows how the three-dimensional scaffolding of chromosomes is related across several species of carnivores, offering a new approach of “comparative scaffotyping” that could be used to identify related genes across species and place them in context. The work, published the week of Feb.</span></span></span></span></span></span></span></span></p> February 21, 2022 - 4:28pm Andy Fell /blog/sequencing-puts-carnivore-chromosomes-context